Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQGSLMLDIGGTWLT-----------AEDRQILRHPEVGGLIIFARNIEHPAQVRELCAAIRAI-RPDLLLAVDQEGGRVQRLRQGFVRLPAMRAIADN-PNA----EELAEHCGWLMATEVQAVGLDLSFAPVLDLDHQRSAVV-GSRAFEGDPERAALLAGAFIRGMHAAGMAATGKHFPGHGWAEADSHVAIPEDARSLEEIRRSDLVPFARL-AGQLDALMPAHVIYPQVD-PQPAGFSRRWLQEILRGELKFDGVIFSDDLSMAGAHVVGDAASRIEAALAAGCDMGLVCNDRAS-AELALAALQRLKVTPPSRLQRMRGK---GYANTDYRQQPRWLEALSALRAAQLID |
| 3SQL Chain:A ((21-358)) | IAQMIVVRGAGYLFDYERPYPQWEADQTTLQRWIEAGIGGVILLGGS---AAEVAQKTKQLQSWAEIPLLIAADIEEGVGQRFR-GATEFPPPMAFGEIWRTDPHQAIALAETMGATTAQEALSLGINWVLAPVLDVNNNPHNPVINIRAFGETPDQVSALGTAFIRGAQQYAVLTTAKHFPGHGDTATDSHLALPTISHDDTRLNTVELPPFKAAIQGGVDAVMNAHLMIPAWDQQYPATLSPAILTGQLRHKLGFKGLIVTDALVMGGITQFAAPDTVVVQAIAAGADILLMPPDVDGAIIAIETAIKTGQL-SESRIYESVERIWQAKQKILTATPS---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SQL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172344 for 2806 contacts (-61.4/contact) +
2D Compatibility (PS) -33700 + (NN) -19330 + (LL) 2484
1D Compatibility (HY) -15600 + (ID) 4500
Total energy: -242990.0 ( -86.60 by residue)
QMean score : 0.460
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