Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNALLALPDLQPERLFVQSGDVRLAVHCWGAPDNGKPTLLMVHGYPDNHETWLPLIRQLAGRYRIVAYDVRGAGASDKPRWSRDYHLQRLSEDLQAVIRATSPDRPVHLLAHDWGSIQTWESVTDPQCRPLIASYTSISGPCLDHVGFWMREHLRQRSPKALKAVFGQLLHSWYIAFFHTPVVPELLWSAGLARLWPQFLKHAEGVRHPQVNPTQASDGRHGVKLYRGNFIRSLFRPRKRHTEVPVQLIVPTRDRYVGAQLFQHLSLWAPRLWRREASVGHWQLLAEPEQLAGWLGEFIDAQETGESPPALQRAQVRPDASSMNGKLVVVTGAGGGIGRSTLLSFAERGASLLAADLDLEAAERSAELARALGATAHVYQVDVGDTQAMETFAEWVRDTLGVPDVVVSNAGIGMAGPMLDTSPAEWERLLRVNLWSVIDGCRLFGRQMIAANKPGHLVNVASGVAFAPSRNYPAYATSKAAVLMLSECLRAELAGRSIGVTAVCPGFVDTGIVQATRFVGMDAERQARRQAKIQRFYKRRRLSPDTVGEKLVRAVERNKAVVSVGSEVHLGALQWRFAPWATRFLARFDLTS |
2D1Y Chain:A ((6-224)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE----GKEVAEAIGGA--FFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGG-GAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIA--------RRDWEDLHAL--RRLGKPEEVAEAVL---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D1Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124343 for 1824 contacts (-68.2/contact) +
2D Compatibility (PS) -22345 + (NN) -3095 + (LL) 26184
1D Compatibility (HY) -9200 + (ID) 3750
Total energy: -136549.0 ( -74.86 by residue)
QMean score : 0.540
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