Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIGHGYDVHRFGEGDFITLGGVRIPHKHGLVAHSDGDVLLHALSDALLGAAALGDIGKHFPDTDPRFKGADSRALLRHVVAIVAEKGWKVGNVDATIVAQAPKMAPHIETMRGLIAEDLGVAVDQVNVKATTTERLGFTGREEGIAVHAVALLMAR
3ERN Chain:B ((7-161))
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLI--
General information:
TITO was launched using:
RESULT:
Template:
3ERN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121319 for 1272 contacts (-95.4/contact) +
2D Compatibility (PS) -17147 + (NN) -12177 + (LL) 244
1D Compatibility (HY) -17200 + (ID) 5550
Total energy: -173149.0 ( -136.12 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_3ERN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ERN-query.scw
PDB file :
Tito_Scwrl_3ERN.pdb
: