Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -MSLSRRIPAALSPFQNRVIGACLLGGLLAAGAPAQAEEATGNARWVSDSLTTFVRSGPTDGYRIVGTLTSGQKVELLGTQGNYSQVRGENGSTVWIPSRDLQEVPGQAERLPQLEQKVAALTAELDGINDTWKTRVQGMQETLDTRKKLIDELQAARSNLDAELGKARSDLRAVQAQLGDENKQVLMRYMVYGGSIAGAGLFAGLILPSLLRVRRKRNDKWF |
2P4W Chain:B ((1-198)) | MGEELNRLLDVLGNETRRRILFLLTKR--PYFVSELSRELGVGQKAVLEHLRILEEAG------LIESRVEKIP----RGRPRKYYMIKKGLRLEILLTPTLFGSEMYEAKGVRKSPEYEQAKELIKS-QEPINVKMRELAEFLHELNERIREIIEEKRELEEARILIETYIENTMRRLAEENRQIIEEIFRDIEK------------ILPPGYARSLKEKFL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P4W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1917 for 1170 contacts (1.6/contact) +
2D Compatibility (PS) -22085 + (NN) -9592 + (LL) 2044
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: -32766.0 ( -28.01 by residue)
QMean score : 0.276
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