Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSTIHPLPSFGLGTFRLTGQVVVDSVRSALELGYRAIDTAQIYGNEADIGRAIAES-----GVPRSELFLTTKVWVDNYAREKLLASLRESLEKLRTDRLDLVLIHWPA---------PGNG--------VELGEYMAALAEAKSLGLTRRIGVSNFNIELTRQA--IAAVGAGEISTNQIELSPYLQNRALTAYLEEQGIAVTSYMTLAYGK----------VLKDPTLAGIAARHRATVAQVALAWAMQLGYAVIPSSTRRENLASNLLARDLRLDAEDMARIAGLERNGREVSPQGLAPAWD |
| 4GAC Chain:A ((13-300)) | -------MPLIGLGTWKSEPGQVKAAIKHALSAGYRHIDCASVYGNETEIGEALKESVGSGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTVRYDSTHYKETWKALEVLVAKGLVKALGLSNFN---SRQIDDVLSVASVRPAVLQVECHPYLAQNELIAHCHARGLEVTAYSPLGSSDRAWRHPDEPVLLEEPVVLALAEKHGRSPAQILLRWQVQRKVICIPKSINPSRILQNIQVFDFTFSPEEMKQLDALNKNWRYIVP-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GAC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140567 for 2117 contacts (-66.4/contact) +
2D Compatibility (PS) -27835 + (NN) -13367 + (LL) 1148
1D Compatibility (HY) -20000 + (ID) 4550
Total energy: -205171.0 ( -96.92 by residue)
QMean score : 0.563
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