Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRPLVATVDLSAIRHNYALAKRCAP-QRQAFAVVKANAYGHGAREVVTALH-DDADGFAVACLEEAAEVRALHASARILLLEGCFEASEYALAGQLRLDLVIQGAEQGEAFLAAG-LDIPLNVWLKLDSGMHRLGFDPAA-LRAWHARLRSHPGVRELNLISHFACADERNHPLTEQQLESFLGLLDLD---FDQRSLANSAAVLTIPAAHMDWLRPGIMLYGSTPLADLSA-AELGLKPAMSLGAQLISLREVAVGESVGYGATWIAERPARIGTVSCGYADGYPRTAPAGTPVLVGGRRAILAGRVSMDMLAVDLSDLPEARVGDPVELWGAG----LSVDEVARACGTLGYELLSKVTARVPRRYSH |
1BD0 Chain:A ((6-370)) | -RDTWAEVDLDAIYDNVENLRRLLPDDTHIMAVVKANAYGHGDVQVARTALEAGASRLAVAFLDEALALREKGIEAPILVLGASRPA-DAALAAQQRIALTVFRSDWLEEASALYSGPFPIHFHLKMDTGMGRLGVKDEEETKRIVALIERHPHFVLEGLYTHFATADEVNTDYFSYQYTRFLHMLEWLPSRPPLVHCANSAASLRFPDRTFNMVRFGIAMYGLAPSPGIKPLLPYPLKEAFSLHSRLVHVKKLQPGEKVSYGATYTAQTEEWIGTIPIGYADGWLRRLQH-FHVLVDGQKAPIVGRICMDQCMIRLPG-P-LPVGTKVTLIGRQGDEVISIDDVARHLETINYEVPCTISYRVPRIFFR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BD0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -220970 for 3007 contacts (-73.5/contact) +
2D Compatibility (PS) -38170 + (NN) -13058 + (LL) 288
1D Compatibility (HY) -27200 + (ID) 6550
Total energy: -305660.0 ( -101.65 by residue)
QMean score : 0.431
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