Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MEKSNNSTLFILL----GFSQNKNIEVLC---FVLFLFCYIAIWMGNLLIM-----ISITCTQLIHQPMYFFLNY------------LSLSDLCYTSTVTPKLMV---------DLLAERKTISYNNCMIQLF---TTHFFGGIEIFILTGMAYDRYVAICKPLHYTIIMSRQKCNTIIIVCCTGGFIHSASQFLLTIFVPFCGPNEIDHYFCDVYPLLKLACSNIHMI--GLLVIANSGLIALVTFVV------LLLSYVFIL---------------------YTIRAYSAERRSKALATCSSHVIVVVLFFAPALFIYIRPVTTFSEDKVFALFYTIIAPMFNPLIYTLRNTEMKNAMRKVWCCQILLKRNQLF |
| 4L9B Chain:A ((2-393)) | VLKGINFPENEASILDLAMQNRSGVLDGMTIDILNTTSNQLALFHGTAVLQGYGIEITGAPDVLVDTTGQSNETMLLCLTIDLNQVNVPSGTAVDYKQIRLEFLDVPTLLKQYWRDHSLHDLIDPRRVISMPLYWITFGQTGTTPLYEQIKSNYIDNSGNPAYGIAARCENFNHFINKVAVQSIPINGVANRPV-SSTASQLTNYKVWRNP-----YLCSQDPRDKFAPDNLVIEEDGIYRIDISGSINIANYTFPARVGGRYFQIVCARNSSANNLAEFGAEQHLPPSGVWTRRVLVGEYTAGMTEQAFSSVATISLFKGDNFFLQFETGTNTSRDSAYNNGYGTSGTHLRNFSYTLERVGDLN--------GTAYYDNGTF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4L9B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -343488 for 2193 contacts (-156.6/contact) +
2D Compatibility (PS) -31412 + (NN) 9175 + (LL) 1216
1D Compatibility (HY) -7600 + (ID) 3050
Total energy: -375159.0 ( -171.07 by residue)
QMean score : 0.007
|
|
|