Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGQVLSNDDWNRYKKEGFLVTKFGSLID--------YVINWARSGSLWPMTFGLACCAVEMMHTASSRYDLDRYGIMFRASPRQADVMIV--AGTLTNKMAAALRKVYDQMADPKYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGML-CLQNKIKRTQNI
2KJQ Chain:A ((1-149))
MGHHHHHHSHMDYPSFDKFLGTENAELVYVLRHKHGQFIYVWGEEGAGKSHLLQAWVAQALEAGKNAAYIDAASMP--LTDAAFEAEYLAVDQVEKLGNEEQALLFSIFNRFRNS------------------------GKGFLLLGSEYTPQQLVIREDLRTRMAYCLVYEVKP----
General information:
TITO was launched using:
RESULT:
Template:
2KJQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51153 for 889 contacts (-57.5/contact) +
2D Compatibility (PS) -15271 + (NN) -10108 + (LL) 1672
1D Compatibility (HY) -2400 + (ID) 1150
Total energy: -78410.0 ( -88.20 by residue)
QMean score : 0.169
(partial model without unconserved sides chains):
PDB file :
Tito_2KJQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KJQ-query.scw
PDB file :
Tito_Scwrl_2KJQ.pdb
: