Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSNIPQNAVEVDTLSSIYTYKELSI-DKLKHEYEITVGSNYIEQKVNSRLQEIAKNAKLPGFRSGKMPYDLVVTNYKNEALEYVVNSTIDYCSSDLMKKIEVKSHIYPKVDIMSLPNLNEEG--EKSNFVYKLSFESMPEVPVIDLDKINLKKVEARIEEEDIKGFVDSIKTRFPSFVSVDDASYQAKNGDKLVIDFEGRIRNKLFQGGSNKNFKVTLGSGTFINGFENQLTGMKKGETKSFKLKFPEDYQTISLAGQEANFSVRVNDIQVAEDFGGDDEMAKKIGFRDCSSLKNHAKEVIGGQCE----EMRDLLIKKELFDYLDANYSFDLPTDVVRQEQQRVERELGS-------------KDDSCKEAERRVKLAMLFMKFSTEHKISLTQNDILNVIVNQYIS-KDVPFDRVFKHFKSDRQFQELVRGQALEHKVTSYIIEKVNKEEQIVSVKELKELFGNI |
| 1T11 Chain:A ((0-378)) | ------------------HMQVTVETLEGLQRRLNITVPAANIEDAVAAELRNIAKNRRFDGFRKGKVPMKMVAKMYGKAVRQDVLGEVMQRHFIEAIVK-----EK---INPAGAPTFAPVEIGEGKDLVFTATFEVYPEVELKGLENIAVEKPAA---DADVAEMLETLRKQQATWKEV---DEAAENGKRVSIDFVGSIDGVEFEGGKAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENLKGKAAKFAIKVNKVEARELPELNDEFVARFGVAE--GGVDALKAEVRKNMERELKQAIKARIKEQAIEGLVKENEIQVPSALIDQEINVLRQQAAQRFGGNVEAAAQLPRELFEEQAKRRVVVGLLLGEVIRTHELKADEEKVKALI-TEMATAY--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T11.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 142970 for 2443 contacts (58.5/contact) +
2D Compatibility (PS) -36028 + (NN) 721 + (LL) 7120
1D Compatibility (HY) 22800 + (ID) 1000
Total energy: 136583.0 ( 55.91 by residue)
QMean score : 0.093
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