Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWR---GKVSVRQLDYFN-QESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSG-VAHIIFIGYYADQHNNPFHMSPYFGYASRL---LSTSGIDYTYVRMAMYMDPLKPYLPELMNMHK--------LIYPAGDGRINYI-TRNDIARGVIAIIKNPDTW--GKRYLLSGYSYDMKELAAILSEASGTEIKYEPVSLETFAEM--YDEPKGFGALLASMYHAGARGLLDQESNDFKQLVND---QPQTLQSFLQENI------------- |
| 1K6I Chain:A ((3-352)) | QQKKTIAVVNATGRQAASLIRVAAAVGHH-VRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTT--SQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNRRVTYVQVPKVEIKVNIPVGYREQLEAIEVVFGEHKAPYFPLPEFSRVTDEARKLWSGWRDMEEYAREVFPIEEEANGLDWML |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K6I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179237 for 2266 contacts (-79.1/contact) +
2D Compatibility (PS) -30664 + (NN) -12978 + (LL) 452
1D Compatibility (HY) -9200 + (ID) 2250
Total energy: -233877.0 ( -103.21 by residue)
QMean score : 0.461
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