Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MANPIKIGIGGPVGAGKTQLIEKVVKRLSKEMSIGVITNDIYTKEDEKILVNSGVLPESRIIGVETGGCPHTAIREDASMNFAAIDELLERHDDIELIFIESGGD----NLAATFSPELVDFSIYIIDVAQGEKIPRKGG---------QGMIKSDFFVINKTDLAPYVGASLEQMAEDTKVFRGKRPFTFTNLKTDEGLDEVIDWIERDTLLKGLS |
2A9K Chain:A ((17-184)) | --ALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKA-DSYR-------K--K---------------------------------VVLDGEEVQIDILDTAGQEDYAAIRDNYFRS-GEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLEDKRQVSVEEAKNRAEQW--NVNYVETSAKTRANVDKVFFDLMREIRARKM- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A9K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37164 for 1199 contacts (-31.0/contact) +
2D Compatibility (PS) -16332 + (NN) -549 + (LL) 2908
1D Compatibility (HY) -2800 + (ID) 1200
Total energy: -55137.0 ( -45.99 by residue)
QMean score : 0.430
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