Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------MRKIQAKKGLSIECKGWEQEAVLRMLYNNLDPEVAERPEDLVVYGGIGKAARNWEAFEAIEKT---------LRELESDETMLVQSGKPVAVFKTHEE------APRVLISNSVLVPE------WANWDHFNELDKKGLIMYGQMTAGSWIYIGSQ-GIVQGTYETFAELGNQHFNGDLAGTVTLTAGLGGMG---------------GAQPLAITMNHGV-----AICVDV---DETRVDKRIDTKYCDVKTADLDEALKLAEEAKERGEG-------LSIGLVGNA--VDIHQAILEKGFKIDIITDQTSAHDPLNGYVPQGYSVEEAKVLREKDPKKYVELSQASMAKHVELMLEFQKRGAVAFDYGNNIRQ------VAFNNGVKNAFDFPG---FVPAYIRPLFCEGKGP--------FRFAALSGDPKDIERADEE-------------MRKLFPENEKL--LRWLDLAEEKISYQG-------LPSRIAWLGYGERAKMGLALNRLVRDGEISAPIVIGRDHLDAGSVASPNRETESM--------KDGSDAVGDWAVLNALIN----TAAGGSWISFHHGGGVGMGYSLHAGMVVVADGSERAERRLERVLTTDPGMG----VARHVDAGYDIAIQTAKEKGIHIPMIDKAGDK- |
| 4M59 Chain:A ((6-714)) | PDAQVLVLAISSHPLPTLAAFLASRRDELLRADITSLLKALELSGHWEWALALLRWAGKEGAADASALEMVVRALGREGQHDAVCALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACSRDGLVDEAVAFFEDLKARGHAPSVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTEEAARCLDTMASPNAFTYNTVMTAYGNVGK--VDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVSGKRGMEDYVTRVLEGMRSSG-VELSRDTYNTLIAAYGRCGSRTN-AFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAFEEARGFLSEVKALEAYIEDA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M59.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43616 for 4021 contacts (-10.8/contact) +
2D Compatibility (PS) -58119 + (NN) -24509 + (LL) 352
1D Compatibility (HY) -18400 + (ID) 5050
Total energy: -149342.0 ( -37.14 by residue)
QMean score : 0.129
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