Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPLETITLAHIYEEQGFFEEALQIYTNILKKTPDNTEA--------------LKQMKRLEKIQKNCAPFKHDALLKQHYLNFI-KGDRLS-VENLEKWLVEWN
2Y4T Chain:A ((40-133))
----HLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMD-FTAAR-LQRGHLLLKQGKLDEAEDDFKKVLKSNP
General information:
TITO was launched using:
RESULT:
Template:
2Y4T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1637 for 471 contacts (3.5/contact) +
2D Compatibility (PS) -8849 + (NN) -10445 + (LL) 656
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -18951.0 ( -40.24 by residue)
QMean score : 0.501
(partial model without unconserved sides chains):
PDB file :
Tito_2Y4T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Y4T-query.scw
PDB file :
Tito_Scwrl_2Y4T.pdb
: