Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----------------------------------------------------------------MKKHSILL---VDGYNMIAFWKDTRQLFKSNRL-----EEAREVLLRKLNHYAHFEHIDIICVFDAQYVPGVRQRYDQYKISVIFTEEDETADSYIERAAAELNQSVLNLVSVATSDLNEQWTIFSQGTLRVSARELEQRVATVKSDLDKMSSQIDLSTPKLRPWNDEQLGKLKDFLDGM------------------------------------------------------------------------------------------------------- |
4V12 Chain:A ((7-343)) | DTSTLESRVGHYYQMEDTYLVGREKVREFARAVQDYHPAHWNLATAADLGHPGLIAPLTFTSAPAMACNQRMFESVVVGYD---MYLQTEEVFEQHRPIVEGDELSIDIELTSVRRIAGRDLITVTNTFTDTA----GEVVHTLHTTVVGITAEDV-DPAIRPAVQGVMMHGINMLGVEETNAPYEKTVRPEGELRIAQGGATRTPTSLNFDDLKVGEELPVHTARL---SRGDLVNYAGVAGDANPLHWDENIAKLAGQPDVIAHGMLTMGLGAGFVSSWSGDPGAITRYAVRLSQPAVVPAEGTEIEYSGRIKSLDPETRTGVVIVAAKSGGRKIFGLATATIRFS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4V12.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16905 for 830 contacts (-20.4/contact) +
2D Compatibility (PS) -16594 + (NN) 3994 + (LL) 888
1D Compatibility (HY) -6800 + (ID) 1350
Total energy: -36767.0 ( -44.30 by residue)
QMean score : 0.175
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