Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKLVATDMDGTFLDE-NGTYDKKRLANVLKKFKEQGIVFTAASGRSLLSLEQLFADF--R----DQMAFIAENGSAAVLF-NRLAYEQHLSREQYLDIIDHLSKSPYMENNE-YVLS-GKDGAYILSDANPDYIEFITHYYDNL-QKV-SHFEDVD-DIIFKVTANFTEETVRQAEEWVNQAIP-YTTAVTTGFKSIDIILSSVNKRNGLEHLCEQYGIRAEEVLSFGDNINDLEMLEWSGKAIATENARPEVKEIADCIIG-HHNNQAVMAYLESMVD |
| 2B30 Chain:A ((26-298)) | DIKLLLIDFDGTLFVDKDIKVPSEN-IDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTIVYDQIGYTLLDETIETDVYAELISYLVEK----NLVNQTIFHRGESNYVTEDNK--YADFLQKMYSENRSIIIRHNEMLKYRTMNKLMIVLDPSESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B30.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101864 for 2215 contacts (-46.0/contact) +
2D Compatibility (PS) -28034 + (NN) -12393 + (LL) 224
1D Compatibility (HY) -11200 + (ID) 2850
Total energy: -156117.0 ( -70.48 by residue)
QMean score : 0.391
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