Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYQEALEWIHSKLAFGIKPGLERMRWMLEQLGNPQNNLSAIHVVGTNGKGSTTSYLQHIFTNSGYQVGTFTSPYIVDFRERISIDGQMIPESDFIKLVETVRPVVERLHLETNLEPATEFEVITVLMFYYFGNSCPVDIVIIEAGMGGYYDSTNMFKALAVTCPSIGLDHQEVLGRTYVDIAEQKVGVLKKGVPFVYANDRQDVEEVFQIKAKETHSQTYRLHNDFYIKEEE-----NYFNYIGPQANIDHIQLQMPGHHQVSNASIAITT-SLLLRDKYPKLTLQTIKDGLEMTKWVGRTELIFPNVMIDGAHNNESVDALVQVIKKYQQKNVHILFAAINTKPIESMLESLSSIAPVSVTSFDYPKSINLDKYPKAYTRVSDWKKWLHDINLTSDKDFYVITGSLYFISQVRQELLLIKTTTT |
| 1FGS Chain:? ((1-296)) | MNYTETVAYIHSFP--RLAGDHRRILTLLHALGNPQQQGRYIHVTGTNGKGSAANAIAHVLEASGLTVGLYTSPFIMRFNERIMIDHEPIPDAALVNAVAFVRAALERLQQQQADFNVTEFEFITALAYWYFRQR-QVDVAVIEVG-----DSTNVITPVVSVLTEVALD-------TITAIAKHKAGIIKRGIPVVTGNLVPDAAAVVAAKVATTGSQWLRFDRDFSVPKAKLHGWGQRFTYEDQDGRISDLEVPLVGDYQQRNMAIAIQTAKVYAKQTEWPLTPQNIRQGLAASHWPARLEKISDTPLIVIDGAHNPDGINGLITALKQLFSQPITVIAGYAAMADRLTAAFSTVYLVPVPGTPRGRLKDSWQEALAASLNDVPDQPIVITGSLYLASAVRQTLLG------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FGS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180627 for 2347 contacts (-77.0/contact) +
2D Compatibility (PS) -29767 + (NN) -11969 + (LL) 2212
1D Compatibility (HY) -18800 + (ID) 5050
Total energy: -244001.0 ( -103.96 by residue)
QMean score : 0.516
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