Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLKHIVLGLALTTLLGVTFSNQEVSASSTSSKVVKVGVMTFSDTEKARWDKIEKLVG-DKAKIKFTEFTDYTQPNQATANKDVDINAFQHYNFLENWNKE-NKKNLIPLEKTYLAPIRIYSEKVKSLKKLKK-GATIAIPNDATNGSRALYVLQSAGLIKLNVSGKKVATVANITSNKKDINIQELDASQTPRALKDVDAAIINNTYIEQANLKP-SDAIFVEKSD-KNSKQWINIIAGRKNWKKQKNAKAIQAILDAYHTDEVKKVIKDTSADIPQW |
| 1P99 Chain:A ((40-272)) | ---------------------------------KVTIGVASND--TK-AWEKVKELAKKDDIDVEIKHFSDYNLPNKALNDGDIDMNAFQHFAFLDQYKKAHKGTKISALSTTVLAPLGIYSDKIKDVKKV-KDGAKVVIPNDVSNQARALKLLEAAGLIKLKKDFGLAGTVKDITSNPKHLKITAVDAQQTARALSDVDIAVINNGVATKAGKDPKNDPIFLEKSNSDAVKPYINIVAVNDKD-LDN--KTYAKIVELYHSKEAQKALQEDVKDGEKP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P99.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60030 for 1887 contacts (-31.8/contact) +
2D Compatibility (PS) -23766 + (NN) -4337 + (LL) 2852
1D Compatibility (HY) -17600 + (ID) 4750
Total energy: -107631.0 ( -57.04 by residue)
QMean score : 0.465
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