Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIKKVLSVTGIILVTVASLAACSSKSHTTKTGKKEVNFATVGTTAPFSYVK-DGKLTGFDIEVAKAVFKGSDNYKVTFKKTEWSSVFTGIDSGKFQMGGNNISYSSERSQKYLFSYPIGSTPSVLAVPKNSN-IKAYNDITGHKTQVVQGTTTAKQLENFNKKHQKNPVTLKYTNENITQILTNLSDGKADFKLFDGLTVNAI-IKNQGLTNLKTIPLTMR-D--QPYIY-FIFGQDQKDLQKYVNNCLKQLRKDGTLSKIAKEYLGGDYVPNEKDLVTPKEK |
| 1LST Chain:A ((2-234)) | --------------------------------LPQTVRIGTDTTYAPFSSKDAKGEFIGFDIDLGNEMC-KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRT---KGVDVVAYA-NQDLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGVGLRKDDTELKAAFDKALTELRQDGTYDKMAKKYFDFNVYGD---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LST.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66760 for 1849 contacts (-36.1/contact) +
2D Compatibility (PS) -24581 + (NN) -8758 + (LL) 3876
1D Compatibility (HY) -8400 + (ID) 2500
Total energy: -107123.0 ( -57.94 by residue)
QMean score : 0.490
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