Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVATLIIIRGNSASGKSKIAKQLQAELGENTLLLSQDYLRREMLGTKDGE----------N-TT----TIPLLINLLNYGYHNCSYIILEGILRSDWYTPVWKHILKHNPNNTYAYYYDLSFQETVKRHSTRLKSLEF---GEDSL----ARWWLEKD----FLK-EIPEKILTKAMSLEDVKKLIMTDVLP
3UMF Chain:A ((7-192))
AKAKVIFVLGGPGSGKGTQCEKLVQKF--HFNHLSSGDLLRAEVQSGSPKGKELKAMMERGELVPLEVVLALLKEAMIKLVDKNCHFLIDGYPRELDQGIKF---EKEVCPCLCVINFDVSEEVMRKRLLK------RVDDNEETIVKRFRTFNELTKPVIEHYKQQNKVITIDASGTVDAIFDKVNHELQK
General information:
TITO was launched using:
RESULT:
Template:
3UMF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67971 for 1042 contacts (-65.2/contact) +
2D Compatibility (PS) -16412 + (NN) -7939 + (LL) 836
1D Compatibility (HY) -400 + (ID) 1100
Total energy: -92986.0 ( -89.24 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_3UMF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UMF-query.scw
PDB file :
Tito_Scwrl_3UMF.pdb
: