Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNKVQERRERKIKEAIKAKNWDEVTRLLQQEQSNAERRDRYHNRRIKDETIASKNAKKSVRYDVIASSDLNPEEALILEELRQAIREAKASLSEIDSKIVEMIAEQGSSYKETARYITEHYKKMSDVTVKSHYCKALKKLAPLLKAYR
2VXG Chain:A ((1216-1350))
------GAMGDSIKQLLMAGQINKAFHQALL-ANDLGLVEFTLRHTDSNQAFARLEQKVLLSLIQQISADMTNHNELKQRYLNEALLAINMAD-----------PITREHAPKVLTELYRNCQQFIKNSPKNSQFSNVRLLMKAIITYR
General information:
TITO was launched using:
RESULT:
Template:
2VXG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 11348 for 975 contacts (11.6/contact) +
2D Compatibility (PS) -14477 + (NN) -7226 + (LL) 1732
1D Compatibility (HY) -800 + (ID) 700
Total energy: -10123.0 ( -10.38 by residue)
QMean score : 0.408
(partial model without unconserved sides chains):
PDB file :
Tito_2VXG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VXG-query.scw
PDB file :
Tito_Scwrl_2VXG.pdb
: