Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------MNVKKHHLAYGAITLVALFSCILA--VMVIFKS-SQVTT-ESLSKADKVRVAKKSKMTKATSKS---------KVEDVKQAPKPSQASNEAPKSSSQSTE-ANSQQQVTASEEAAVEQAVVTENTPATSQAQQAYAVTETTYRPAQHQTSGQVLSNGN-TAGAIGSAAAAQMAAATGVPQSTWEHIIARESNGNPN---------------VANASGASGLFQTM-PGWGSTATVQDQVNSAIKAYRAQGLSAWGY-------------------- |
| 3GN6 Chain:A ((22-321)) | FNPWTDAALDTIVNQALTLYAEMRVVPAHHDAFLAAIDTVSAKLRVLPGFLSLALKQMSGDSTMVKNYPETYKGVLATAYLDGVAAGTQPYFYNLFVRFADGRAARAAGFEALFETHIHPLLHAMADGPELL--AYRAVLQSVVAGDRHAIYRGAEEIRSFLRRPVELPERET--VTVENHVMVPEDKHAAWEPQVAILLQVAQDTFEPQDEPSGVGLPGARDNRYYRKALSTEILRNAHADGGLRAYIMHGVWES--VWDHENSHLDPRFLAAAGPVGAAAVVGPVEPFYLTRRLVVAD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 48519 for 1366 contacts (35.5/contact) +
2D Compatibility (PS) -23339 + (NN) -5954 + (LL) 192
1D Compatibility (HY) -2000 + (ID) 1800
Total energy: 15618.0 ( 11.43 by residue)
QMean score : 0.127
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