Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGTHAATMRVRAGVRSSPLLLHAGTPPTAAAAESGMRTLVTGSSGHLGEALVRTLRARG--ADIVSLDSRP--------------SRYTNIVGCVSDRALLRDVMAGVEVVFHAAAHHKPQLAFLPRQAFLDTNIIGTQTVLDAAVAA-NVRAFVMTSSTTVFGDALTPPADQPAAWIDESVTPIPKNIYGVTKASSEDLCQLAHRNDGLACVVLRVARFFVEGDDMPDLYD----G-RSQDNIK---ANEYACRRVALEDAVDAHLNAAQRAPQLGFGRYLVSATTPFTRDDLTQLRTDAASVFARRVPLAAAVWTQRGWRFPDRLDRVYVNSRARRDLNWRPRFDLNAVAARLARGQSVHTPLSQLVGSKAYAHSSYHRGVFAPARP |
2HUN Chain:A ((3-315)) | ----------------------------------SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDIL-------KGSFTENDRLMPSSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGT---VRDWLYVEDHVRAIELVLLKG--ESREIYNISAGEEKTNLEVVKIILRLMGKGEELIELVE----D---RPGHDLRYSLDSWKITRDLKWRPKYTFDEGIKKTIDWYLKNE-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HUN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135485 for 2382 contacts (-56.9/contact) +
2D Compatibility (PS) -31283 + (NN) -14067 + (LL) 3928
1D Compatibility (HY) -10400 + (ID) 3300
Total energy: -190607.0 ( -80.02 by residue)
QMean score : 0.395
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