Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSIPRLPPLNAVRAFEAAARLGSYVAAAKALHVTQPAVGRHVRLLEDWLGARLFERTSRGVLLTPAGRQYYAAVSTALQQIAEAGGQLSGAR-----WLRIMAVPAFSRRWLTSRLETLCAQRPGLKIALE---PNPTFDHVEERSADLGIVYGLPGQYANPRALLIRPKVFPVCSPAYLAAAGPLESAEQLVAHKLI--HVDDGEWWNLWFSAIGVDVEVRPAVLYLSN--DHALARAEEGLGIALANEVLVRQELRSGALVRPLAAEAALECYQVLTPPGTPSADVEWFIGWLGEALREEFPDAVTS |
1IZ1 Chain:A ((1-292)) | ------MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAARGDVGELSVAYFGTPIYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKFGKTCKLADLRAVELTLFPRGGRPSFADEVIGLFKHAGIEPRIARVVEDATAALALTMAGAASSIVPASVAAIR-WPDIAFARIVGTRVKVPISCIFRKEKQPPILARFVEHVRRSA---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IZ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173164 for 2122 contacts (-81.6/contact) +
2D Compatibility (PS) -29447 + (NN) -3524 + (LL) 1280
1D Compatibility (HY) -5200 + (ID) 2400
Total energy: -212455.0 ( -100.12 by residue)
QMean score : 0.392
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