Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPASFPRLGLLGALCSIVPLLHASEPTTDAALIEKGRYVAQLGDCIACHTGPQGAPMAGGLELKTPMGTIYSTNITPDRETGIGRYSFEEFDRAMRKGVTAEGVNLYPAMPYPSYAKISEEDMRALYAYLMHGVQPVTQANTPSAMSWPFNQRWGLSLWNWAFLDDAPFTPSSDADPVINRGAYLVQGLGHCGACHTPRGIAFQEKAMSEAGRSGQFYLAGETVEQWQALSLRNLWTVEDTVQLLKTGQNRFATVSGSMTDVIHHSTQHFSDDDLLAIASYLKSLPAGKDDLPMPDSERPLAAPVDLYSSRGGLGYAQFCSDCHRKDGSGVPGMFPPLAGNPTVASANPSTLLHITLTGWKTAQTATHSRVYTMPGFAQLEDREIAEILSFVRSSWGNQGSSIDAGQVKKLRQRIEAGNGPATTFVSPRLADMLAAPNAEQVVRGMRLHLETRELLPANVGNQLHCTSCHLNAGTVAD-------------GSPFVGVSAFFP-SYAPRAGKVIGLEERINGCFRR--SMNGK----------------------P---LPPD-SADMQAMVAYFDWMKNNTRPQDKVAGRGVGKVDPALKPDPENGRKVYA-RQCVVCHGENGEGLRNS------------------------------AGEMLFPPLWGDE--SFNIGAGMARTFTAAAFVKHNMPIGFQERFPLGQGGLSDQDAVDVAEYFSHQPRPDFPDKIKDWPKDKRPLDARY
2VHD Chain:A ((27-314))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SEQQRELGKKLFFDPR--LS--RSHVLSCNTCHNVGTGGADNVPTSVGHGWQKGPRNSPTVFNAVFNAAQFWDGRAKDLGEQAKGPIQNSVEMHSTPQLVEQTLGSIPEYVDAFRKAFPKAGKPVSFDNMALAIEAYEATLVTPDSPFDLY----LKGDDKALDAQQKKGLKAFMDSGCSACHNGINLGGQAYFPFGLVKKPDASVLPSGDKGRFAVTKTQSDEYVFRAAPLRNVALTAPYFHSGQVWEL--KDAVAI-----MGNAQL--GKQLAPDDVENIVAFLHSLSGKQPRVEYPLLPAS--------


General information:
TITO was launched using:
RESULT:

Template: 2VHD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46516 for 1600 contacts (-29.1/contact) +
2D Compatibility (PS) -22851 + (NN) -13713 + (LL) 24052
1D Compatibility (HY) 400 + (ID) 2000
Total energy: -60628.0 ( -37.89 by residue)
QMean score : 0.312

(partial model without unconserved sides chains):
PDB file : Tito_2VHD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VHD-query.scw
PDB file : Tito_Scwrl_2VHD.pdb: