Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPASFPRLGLLGALCSIVPLLHASEPTTDAALIEKGRYVAQLGDCIACHTGPQGAPMAGGLELKTPMGTIYSTNITPDRETGIGRYSFEEFDRAMRKGVTAEGVNLYPAMPYPSYAKISEEDMRALYAYLMHGVQPVTQANTPSAMSWPFNQRWGLSLWNWAFLDDAPFTPSSDADPVINRGAYLVQGLGHCGACHTPRGIAFQEKAMSEAGRSGQFYLAGETVEQWQALSLRNLWTVEDTVQLLKTGQNRFATVSGSMTDVIHHSTQHFSDDDLLAIASYLKSLPAGKDDLPMPDSERPLAAPVDLYSSRGGLGYAQFCSDCHRKDGSGVPGMFPPLAGNPTVASANPSTLLHITLTGWKTAQTATHSRVYTMPGFAQLEDREIAEILSFVRSSWGNQGSSIDAGQVKKLRQRIEAGNGPATTFVSPRLADMLAAPNAEQVVRGMRLHLETRELLPANVGNQLHCTSCHLNAGTVAD-------------GSPFVGVSAFFP-SYAPRAGKVIGLEERINGCFRR--SMNGK----------------------P---LPPD-SADMQAMVAYFDWMKNNTRPQDKVAGRGVGKVDPALKPDPENGRKVYA-RQCVVCHGENGEGLRNS------------------------------AGEMLFPPLWGDE--SFNIGAGMARTFTAAAFVKHNMPIGFQERFPLGQGGLSDQDAVDVAEYFSHQPRPDFPDKIKDWPKDKRPLDARY |
2VHD Chain:A ((27-314)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SEQQRELGKKLFFDPR--LS--RSHVLSCNTCHNVGTGGADNVPTSVGHGWQKGPRNSPTVFNAVFNAAQFWDGRAKDLGEQAKGPIQNSVEMHSTPQLVEQTLGSIPEYVDAFRKAFPKAGKPVSFDNMALAIEAYEATLVTPDSPFDLY----LKGDDKALDAQQKKGLKAFMDSGCSACHNGINLGGQAYFPFGLVKKPDASVLPSGDKGRFAVTKTQSDEYVFRAAPLRNVALTAPYFHSGQVWEL--KDAVAI-----MGNAQL--GKQLAPDDVENIVAFLHSLSGKQPRVEYPLLPAS-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VHD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46516 for 1600 contacts (-29.1/contact) +
2D Compatibility (PS) -22851 + (NN) -13713 + (LL) 24052
1D Compatibility (HY) 400 + (ID) 2000
Total energy: -60628.0 ( -37.89 by residue)
QMean score : 0.312
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