Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDRYIAFANSPVGRRLVGAVGLPSPLRLERWQAGRVRPVDGPLVIGGSGALAEAVLPFAGKLTDAVFAAVDGQFELPRWTAEHSPRAKAVLFDASGLTRFEQLVALRDFFQPVLKGLDKCPKVVVLGRPPESLKDPVTASVQRSLEGFTRSLGKEIRRGGNVQLLYVGKGAEDQLEGALRFFLSPKSAYVSGQVIRLAANSAQVHDWSKPLAGQRALVTGAARGIGAAIAETLARDGAEVVLLDVPPAREALEGLAARLG--GRAVALDICAADAGQQLVEALPEG---VDIVVHNAGITRDKTLAKMSSDFWNSVINVNLNAPQVLTQALLDGGKLHDNGRVVLLASISGIAGNLGQSNYAVSKAGLIGLAQAWAPALGKRGITINAVAPGFIETQMTAAIPLTIRE-------AGRRMNSMSQGGLPQDVAETVAWFAQPSSGAVSGQVLRVCGQSLLGA |
| 1Q7B Chain:A ((5-239)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GKIALVTGASRGIGRAIAETLAARGAKVI--GTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRL-------GGAQEIANAVAFLASDEAAYITGETLHVNG------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q7B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122707 for 1866 contacts (-65.8/contact) +
2D Compatibility (PS) -23871 + (NN) -2082 + (LL) 14384
1D Compatibility (HY) -14800 + (ID) 4700
Total energy: -153776.0 ( -82.41 by residue)
QMean score : 0.498
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