Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQKYEKLEKIGEGTYGTVFKAKNRE--THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL--HSDKKLTLVFEFCDQDLKKYFDSC----NGDLDPEIVKSLLFQLLKGLGFCHSRNVLHRDLKPQNLLI----NRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV----DDQLKRIFRLLGTPTEEQWPAMTKLPDYKP----YP--MYPATTSLVNV----VPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP |
| 4F6U Chain:A ((27-341)) | -------CKVGRGTYGHVYKAKRKDGKDDKDYALKQIE----GTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASK-VQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF--------------VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT-SEPIFHCRQENPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYT-NCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4F6U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142651 for 1942 contacts (-73.5/contact) +
2D Compatibility (PS) -27626 + (NN) -14748 + (LL) 1776
1D Compatibility (HY) -30400 + (ID) 5600
Total energy: -219249.0 ( -112.90 by residue)
QMean score : 0.505
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