Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSEENESTALPQVLAQPSTSRKRPREGEAEGAE
3NYV Chain:A ((23-287))-----IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ-----KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH----GTYDEKCDVWSTGVILYILLSGCPPFNGA-NEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT-------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3NYV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -175317 for 2052 contacts (-85.4/contact) +
2D Compatibility (PS) -28195 + (NN) -15481 + (LL) 3064
1D Compatibility (HY) -24400 + (ID) 5300
Total energy: -245629.0 ( -119.70 by residue)
QMean score : 0.400

(partial model without unconserved sides chains):
PDB file : Tito_3NYV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NYV-query.scw
PDB file : Tito_Scwrl_3NYV.pdb: