Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKKSRRCVLL
2H7V Chain:B ((5-183))
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVSLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCP------------
General information:
TITO was launched using:
RESULT:
Template:
2H7V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143265 for 1434 contacts (-99.9/contact) +
2D Compatibility (PS) -19454 + (NN) -8714 + (LL) 724
1D Compatibility (HY) -24000 + (ID) 6400
Total energy: -201109.0 ( -140.24 by residue)
QMean score : 0.773
(partial model without unconserved sides chains):
PDB file :
Tito_2H7V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H7V-query.scw
PDB file :
Tito_Scwrl_2H7V.pdb
: