Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQRVEDAFYTLVREIRQYRLKKISKEEKTPGCVKIKKCIIM
2Q21 Chain:A ((1-171))
MTEYKLVVVGAVGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLRKL------------------
General information:
TITO was launched using:
RESULT:
Template:
2Q21.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112717 for 1363 contacts (-82.7/contact) +
2D Compatibility (PS) -19282 + (NN) -10406 + (LL) 1364
1D Compatibility (HY) -23600 + (ID) 7850
Total energy: -172491.0 ( -126.55 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_2Q21.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q21-query.scw
PDB file :
Tito_Scwrl_2Q21.pdb
: