Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALKSLVLLSLLVLVLLLVRVQPSLGKETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV
3EUY Chain:A ((1-124))
--------------------------KETAAAKFERQHMDSST---SSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV
General information:
TITO was launched using:
RESULT:
Template:
3EUY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42428 for 867 contacts (-48.9/contact) +
2D Compatibility (PS) -13380 + (NN) -7400 + (LL) 3396
1D Compatibility (HY) -14000 + (ID) 6050
Total energy: -79862.0 ( -92.11 by residue)
QMean score : 0.418
(partial model without unconserved sides chains):
PDB file :
Tito_3EUY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EUY-query.scw
PDB file :
Tito_Scwrl_3EUY.pdb
: