Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQQKSLTLIVALTTSYGIGRSNSLPWKL-KKEISYFKRVTSFVPTFD----------------SFESMNVVLMGRKTWESIPLQFRPLKGRINVVITRNESLD-LGNGIHSAKSLDHALELLYRTYGSESSVQINRIFVIGGAQLYKAAMDHPKLDRIMATIIYKDIHCDVFFPLKFRDKEWSSVWKKEKHSDLESWVGTKVPHGKINEDGFDYEFEMWTRDL
2BL9 Chain:A ((23-238))
--SAGTKNEPFSPRTFRGLGNKGTLPWKCNSVDMKYFSSVTTYVDESKYEKLKWKRERYLRMEA--KLQNVVVMGRSSWESIPKQYKPLPNRINVVLSKTLTKEDVKEKVFIIDSIDDLLLLLKKL-------KYYKCFIIGGAQVYRECLSRNLIKQIYFTRINGAYPCDVFFPEFD-----ESEFRVTSVSE------------VYNSKGTTLDFLVYSKV-
General information:
TITO was launched using:
RESULT:
Template:
2BL9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72545 for 1170 contacts (-62.0/contact) +
2D Compatibility (PS) -18804 + (NN) -4669 + (LL) 1356
1D Compatibility (HY) -14400 + (ID) 2850
Total energy: -111912.0 ( -95.65 by residue)
QMean score : 0.474
(partial model without unconserved sides chains):
PDB file :
Tito_2BL9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BL9-query.scw
PDB file :
Tito_Scwrl_2BL9.pdb
: