Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ASPDWGYDDKNGPEQWSKLYPIANGNNQSPVDIKTSETKHDTSLKPISVS-Y--NPATAKEIINVGHSFHVNFEDNDNRSVLKGGPFSDSYRLFQFHFHWGSTNEHGSEHTVDGVKYSAELHVAHWNSAKYSSLAEAASKADGLAVIGVLMKVGE-ANPKLQKVLDALQAIKTKGKRAPFTNFDPSTLLPSSL-DFWTYPGSLTHPPLYESVTWIICKESISVSSEQLAQFRSLLSNVEGDNAVPMQHNNRPTQPLKGRTVRASF
3IAI Chain:A ((4-256))
-QSHWRYG---GDPPWPRVSPACAGRFQSPVDIRPQLAAFSPALRPLELLGFQLPPLPELRLRNNGHSVQLTLPPG---LEMALGP-GREYRALQLHLHWGAAGRPGSEHTVEGHRFPAEIHVVHLST-AFARVDEALGRPGGLAVLAAFLEEGPEENSAYEQLLSRLEEIAEEGSETQVPGLDISALLPSDFSRYFQYEGSLTTPPCAQGVIWTVFNQTVMLSAKQLHTLSDTLWGPGD---SRLQLNFRATQPLNGRVIEASF
General information:
TITO was launched using:
RESULT:
Template:
3IAI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101980 for 1986 contacts (-51.3/contact) +
2D Compatibility (PS) -27010 + (NN) -13456 + (LL) 260
1D Compatibility (HY) -18400 + (ID) 4150
Total energy: -164736.0 ( -82.95 by residue)
QMean score : 0.634
(partial model without unconserved sides chains):
PDB file :
Tito_3IAI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IAI-query.scw
PDB file :
Tito_Scwrl_3IAI.pdb
: