Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRMLLALLALSAARPSASAESHWCYEVQAESSNYPCLVPVKWGG------NCQ-KDRQSPINIVTTKAKVDKKLGRFFFSGYDKKQTWTVQNNGHSVMMLLEN-KASISGGGLPAPYQAKQLHLHWSDLPYKGSEHSLDGEHFAMEMHIVHEKEKGTSRNVKEAQDPEDEIAVLAFLVEAGTQVNEGFQPLVEALSNIPKPEMSTTM-AESSLLDLLPKEEKLRHYFRYLGSLTTPTCDEKVVWTVFREPIQLHREQILAFSQKLYYDKEQTVSMKDNVRPLQQLGQRTVIKSGAPGRPLPWALPALLGPMLACLLAGFLR |
| 1KOP Chain:A ((2-222)) | --------------------THWGYTGHD--------SPESWGNLSEEFRLCSTGKNQSPVNITET---VSGKLPAIKV-NYKPS-MVDVENNGHTIQVNYPEGGNTLTVNG--RTYTLKQFHFHV------PSENQIKGRTFPMEAHFVHLDEN-------------KQPLVLAVLYEAGK-TNGRLSSIWNVMPMTAG---KVKLNQPFDASTLLPKR---LKYYRFAGSLTTPPCTEGVSWLVLKTYDHIDQAQAEKFTRAVG--------S-ENNRPVQPLNARVVI------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KOP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115107 for 1647 contacts (-69.9/contact) +
2D Compatibility (PS) -22517 + (NN) -2237 + (LL) 6012
1D Compatibility (HY) -12800 + (ID) 3650
Total energy: -150299.0 ( -91.26 by residue)
QMean score : 0.260
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