Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MACGLVASNLNLKPGECLRVRGEVAPDAKSFVLNLGKDSNNLCLHFNPRFNAHGDANTIVCNSKD--GGAWGTEQREAVFPFQPGSVAEVCITFDQANLTVKLPDGYEFKFPNRLNLEAINYMAADGDFKIKCVAFD
1C1L Chain:A ((3-137))
--GGLQVKNFDFTVGKFLTVGGFINNSPQRFSVNVGESMNSLSLHLDHRFNYGADQNTIVMNSTLKGDNGWETEQRSTNFTLSAGQYFEITLSYDINKFYIDILDGPNLEFPNRYSKEFLPFLSLAGDARLTLVKLE
General information:
TITO was launched using:
RESULT:
Template:
1C1L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57578 for 943 contacts (-61.1/contact) +
2D Compatibility (PS) -14058 + (NN) -2107 + (LL) 352
1D Compatibility (HY) -11200 + (ID) 2150
Total energy: -86741.0 ( -91.98 by residue)
QMean score : 0.451
(partial model without unconserved sides chains):
PDB file :
Tito_1C1L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C1L-query.scw
PDB file :
Tito_Scwrl_1C1L.pdb
: