Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDFPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGK-HVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQ----------------------------------ARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK |
3OYR Chain:A ((27-343)) | --LVRLAEADMAGVNRLITDRMQS---DVAIIPALAEHLIAAGGKRLRPLMTVAAARLAGADNDHFQKLAAAVEFIHTATLLHDDV--V---------VAAHLIWGGAQSVLVGDFLFARAFELMVETN--------SMKALEILARAS--RVIAEGEVLQLMRSHDLNLSQAVYLEIIQAKTAELFAAASEAGAVSAGV-DVAKSEALRDYGLNLGLAFQLADDALDY-------------------ATLPLLLAIARSGPREAEFWERAIGTEADFRRARELIIGSGALDATLDLAADYADKAKAALAMFPAND-WREALEELADFAVSR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OYR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147041 for 2119 contacts (-69.4/contact) +
2D Compatibility (PS) -27021 + (NN) -12524 + (LL) 1604
1D Compatibility (HY) -13200 + (ID) 3850
Total energy: -202032.0 ( -95.34 by residue)
QMean score : 0.418
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