Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDFPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGK-HVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQ----------------------------------ARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK
3OYR Chain:A ((27-343))--LVRLAEADMAGVNRLITDRMQS---DVAIIPALAEHLIAAGGKRLRPLMTVAAARLAGADNDHFQKLAAAVEFIHTATLLHDDV--V---------VAAHLIWGGAQSVLVGDFLFARAFELMVETN--------SMKALEILARAS--RVIAEGEVLQLMRSHDLNLSQAVYLEIIQAKTAELFAAASEAGAVSAGV-DVAKSEALRDYGLNLGLAFQLADDALDY-------------------ATLPLLLAIARSGPREAEFWERAIGTEADFRRARELIIGSGALDATLDLAADYADKAKAALAMFPAND-WREALEELADFAVSR--


General information:
TITO was launched using:
RESULT:

Template: 3OYR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -147041 for 2119 contacts (-69.4/contact) +
2D Compatibility (PS) -27021 + (NN) -12524 + (LL) 1604
1D Compatibility (HY) -13200 + (ID) 3850
Total energy: -202032.0 ( -95.34 by residue)
QMean score : 0.418

(partial model without unconserved sides chains):
PDB file : Tito_3OYR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OYR-query.scw
PDB file : Tito_Scwrl_3OYR.pdb: