Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGAKNNVTEFVLFGLFESREMQHTCFVVFFLFHVLTVL-GNLLVIITINARKTLKSPMYFFLSQLSFADICYPSTTIPKMIADTFVEHKIISFNGCMTQLFSAHFFGGTEIFLLTAMAYDRYVAICRPLHYTAIMDCRKCGLLAGASWLAGFLHSILQTLLTVQLPFCGPNEIDNFFC--DVHPLLKL-ACADTYMVGLIVVANSGMISLASFFILIIS--------------YVIILL----NLRSQSSEDRRKAVSTCGSHVITVL------LVLMPPMFMYIRPSTTLAADKLIILFNIVMPPLLNPLIYTLRNNDVKNAMRKLFRVKRSLGEK---------- |
| 3P4G Chain:A ((23-323)) | ----HSFDHYIGSAFDAS---NNNVAVTGNVSATLNVLAGDDKVSIDGNVEDVLVAANVAVLDMGTGNDQLYVAGDVLGKI-DAGTGNDEIYIKGDVSAAVDAGT-GNDEVYIGGNLSGD--------------LD-------------AGTDNDNIQIGGDVNAALNAGTGNDNLIIGHDVSGIVNMGTDNDTVEVGRTINASGKVLLDTGDDSLLVSGDLFGEVDGGTGNDTIIIAGKVSGNIQGGTGNDIVRVQSQVWAEANISLGTGDDVLIVEHELHGTVAGNEG---DDSIYLKFYTKEQYNN-------NSDLRNRVANFEHIRVSDGVVKGSPADFADY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P4G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -291863 for 2245 contacts (-130.0/contact) +
2D Compatibility (PS) -27712 + (NN) 4251 + (LL) 4392
1D Compatibility (HY) -2000 + (ID) 2650
Total energy: -315582.0 ( -140.57 by residue)
QMean score : 0.143
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