Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKQYSVGNQHSNYRSLLFPFLCSQMTQLTASGNQTMVTEFLFSMFPHAHRGGLLFFIPLLLIYGFILTGNLIMFIVIQVGMALHTPLYFFISVLSFLEICYTTTTIPKMLSCLISEQKSISVAGCLLQMYFFHSLGITESCVLTAMAIDRYIAICNPLRYPTIMIPKLCIQLTVGSCFCGFLLVLPEIAWISTLPFCGSNQIHQIFCDFTPVLSLACTDTFLVVIVDAIHAAEIVASFLVIALSYIRIIIVILGMHSAEGHHKAFSTCAAHLAVFLLFFGSVAVMYLR-FSATYSVFWDTAIAVTFVILAPFFNPIIYSLKNKDMKEAIGRLFHYQKRAGWAGK |
1NNW Chain:A ((2-252)) | VYVAVLANIA---------------------GNLPALTAALSRIEEMREEGYE--------IEKYYILGNIVGL-------------------------FPYPKEVIEVIKDLTKKENVKIIRGKYDQIIAMSDPHATDPGYIDKLELPGHVKKALKFTWEKL--------------------GHEGREYLRDLP----IYLVDKIGGNEVFGVYGSPINPFDGEVLAEQPTSYYEAIMRPVKDYE---MLIVASPMYPVDAMTRYG-------RVVCPGSVGFPPGKEHKATFALVDVDTLKPKFIEVEYDKKIIEERIRAEGLPEEIIKILYHGGRP----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NNW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -312341 for 2169 contacts (-144.0/contact) +
2D Compatibility (PS) -25696 + (NN) 6151 + (LL) 8584
1D Compatibility (HY) -4800 + (ID) 1450
Total energy: -329552.0 ( -151.94 by residue)
QMean score : 0.144
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