Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTLLPPALLTCWLLAPVNSIHPECRFHLEIQEEETKCAELLRSQTEKHKACSGVWDN-ITCWRPANVGETVTVPC-PKVFSNFYSKAGNISKNCTSDGWSETFPDF--VDACGYSDPEDESKIT-FYILVKAIYTLGYSVSLMSLATGSIILCLFRKLHCTRNYIHLNLFLSFILRAISVLVKDDVLYSSSG-----TLHCPD-QPSSWVGCKLSLVFLQYCI---MANFFWLLVEGLYLHTLLVAMLPPRRCFLAYLLIGWGLPTVCIGAWTAARLYLEDTGCWDTNDHSVPWWVIRIPILISIIVNFVLFISIIRILLQKLTSPDVGGNDQSQYKRLAKSTLL---LIPLFGVHYMVFAVFPISISSKYQIL----FELCLGSFQGLVVAVLYCFLNSEVQCELKRKWRSRCPTPSASRDYRVCGSSFSRNGSEGALQFHRGSRAQSFLQTETSVI |
| 4X90 Chain:A ((5-380)) | ----HPPVVLV----------PGDLGNQLEAKLDKP---------TVVHYLCSKKTESYFTIWLNLELLLPVIIDCWIDNIRLVYNKTSRATQF--PDGVDVRVPGFGKTFSLEFLDPSKSSVGSYFHTMVESLVGWGYTRG------EDVRGAPYDWRRAPNENGPYFLALREMIEEMYQLYGGPVVLVAHSMGNMYTLYFLQRQPQAWKDKYIRAFVSLGAPWGGVAKTLRVLASGDNNRIPVIGPLKIREQQRSAVSTSWLLPYNYT--WSPEKVFVQ------TPT-----------------INYTL--RDYRKFFQDI------GFEDGWLMRQDTEGLVEATMPPGVQLHCLYGTGVPTPDSFYYESFPDRDPKICFGDGDGTV------NLKSALQCQ---AWQSR-------QEHQVLLQELP--GSEH-IEMLANATTLAYLKRVLLGP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4X90.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -264596 for 2885 contacts (-91.7/contact) +
2D Compatibility (PS) -36463 + (NN) 1332 + (LL) 6392
1D Compatibility (HY) -12400 + (ID) 3650
Total energy: -309385.0 ( -107.24 by residue)
QMean score : 0.179
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