Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLGSLGLWALLPTAVEAPPNRRTCVFFEAPGVRGSTKTLGELLDTGTELPRAIRCLYSRCCFGIWNLTQDRAQVEMQGCRDSDEPGCESLHCDPSPRAHPSPGSTLFTCSCGTDFCNANYSHLPPPGSPGTPGSQGPQAAPGESIWMALVLLGLFLLLLLLLGSIILALLQRKNYRVRGEPVPEPRPDSGRDWSVELQELPELCFSQVIREGGHAVVWAGQLQGKLVAIKAFPPRSVAQFQAERALYELPGLQHDHIVRFITASRGGPGRLLSGPLLVLELHPKGSLCHYLTQYTSDWGSSLRMALSLAQGLAFLHEERWQNGQYKPGIAHRDLSSQNVLIREDGSCAIGDLGLALVLPGLTQPPAWTPTQPQGPAAIMEAGTQRYMAPELLDKTLDLQDWGMALRRADIYSLALLLWEILSRCPDLRPDSSPPPFQLAYEAELGNTPTSDELWALAVQERRRPYIPSTWRCFATDPDGLRE---LLEDCWDADPEARLTAECVQQRLAALAHPQESHPFPESCPRGCPPLCPEDCTSIPAPTILPCRPQRSACHFSVQQGPCSRNPQPACTLSPV |
| 3MDY Chain:C ((45-334)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSW-TQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFST-QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFI-------IPPNT--------RVGTKRYMPPEVLDESLNRNHFQSYI-MADMYSFGLILWEVARRCV---SGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRW----SSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDI----------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MDY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142672 for 2320 contacts (-61.5/contact) +
2D Compatibility (PS) -30232 + (NN) -19393 + (LL) 11628
1D Compatibility (HY) -23600 + (ID) 5050
Total energy: -209319.0 ( -90.22 by residue)
QMean score : 0.460
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