Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEQKCLFVTIAGLPNAGKSTLINSITGKKIAIVTPKVQTTRTQIRGIAIY-NETQIIFTDSPGIFSAET--KLEKALVKSAWSAIKGDDVILLLIDASSYLKNIERIKTIFTR-LRHTKTKCIFVINKIDLVKKPEL-KMTYKHL-DLLYKLKKIFTISALKSDGLSDLMDYLSEVAPVSPWFYGEDQVTDSSTSFLSAEITREKLFLNLREELPYSTAVITEQFEEKK--DESLVIKQVIFVLKDSHKKIVLGKGGSNIKKIGIEARIELEKLFERKVHLFLFVKVRP-WTDRPEEYIDDV |
| 3IEV Chain:A ((7-301)) | --HMKVGYVAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLGVKNIPNEAQIIFLDTPGIYEPKKSDVLGHSMVEIAKQSLEEADVILFMIDATEGWRPRDE--EIYQNFIKPLNKPVIVVINKIDKIGPAKNVLPLIDEIHKKHPELTEIVPISALKGANLDELVKTILKYLPEGEPLFPEDMITDLPLRLLAAEIVREKAMMLTREEVPTSIAVKINEIKPGDANPNMLVIKGEIIVDRENLKPIIIGKKGQRLKEIGKRARQELELILGRPVYLELWVKVVPDWRRRPEYVRLFG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IEV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179002 for 2277 contacts (-78.6/contact) +
2D Compatibility (PS) -31364 + (NN) -9007 + (LL) 540
1D Compatibility (HY) -23600 + (ID) 5400
Total energy: -247833.0 ( -108.84 by residue)
QMean score : 0.533
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