Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MELISNLIHQLGGGIYNFLSFSLIISVIVFVHEYGHYIIAKAYKVKVESFSIGFGPGIFGFYDKSGTRWKLSAIPLGGYVKMLGDNNAANTPIDQQELTEEEKSYSLHTKPRYQKAAIVFAGPFANMIFAIIALTVFFSVVGYYHTPPVIGKVIEGSAAKQAGLLPGDTITQINEYKIKYFEDISRVMMSNPETKIEIKYSRNNEEYSTSLTPLTIEDKDIFGNIIERKTIGITSVNIKELRQSSFFGAVSLSVSETYHTMCLTIKALFQIIVGKRSVNEIGGPIKIAKYSGQSAKKGFIMVLYFMAIISANLAAINLLPIPLLDGGHLFHYIIEAVIRRDLSLKYQKYAATFGASVLFLLMAIAISNDIRHLF |
2PZD Chain:A ((5-113)) | --------------------------------------------------------------------------------------------------------------RRYIGVMMLTLSPSILAELQLREPSFPDVQHG-----VLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVYEAVRTQSQLAVQIRRGRETLTLYVTPEVTGWTMFWV--------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PZD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38116 for 729 contacts (-52.3/contact) +
2D Compatibility (PS) -10862 + (NN) 190 + (LL) 20188
1D Compatibility (HY) -800 + (ID) 1200
Total energy: -30600.0 ( -41.98 by residue)
QMean score : 0.292
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