Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNNDPTVNLPISIRKLSSNKFIEEICQDQFEDQDNALFEDSFINKIKEGDVVEGIITRVNPNDIVVHIGLKSDGRI-PIKELGCNDKIVVGSKIRVYVERIEDYHGNV-VLSREKAIRDEKWNKLEEDAVTKAEVSGVIKRSIKCGFIVDLGDGISAFLPLSHVDLKQ-VKDARHLIETEQKFIVLKMDK-KQG-NIVVSRKLVLEKLHAGEKTKFLEFLNEGDIIEGKIKSITHYGVFVGIHESDAVGVIDGLLHITDISWSRVSHPSAAFACGQIIKVKIIKIDKENAKVSLGIKQLEDNPWQDVESKYQVDSIHKGHITSIEDYGLFVELKPGIEGLVHSSEITWVKSNLPVNSLVTRGQEVSVKILNVDITKNRMSLSMKRCVDNPWQVFVNKY-PPGSIVSGKVKNNT-ISYMSITFNDDEIDENVEGTIYAQDLSWSKNGSDEIKKYNVGDTIEA-KVIRANVNRTRIYLGIKQIEYDPLIELIKKVKVGDKMQVTVGKREDSGL-V-VEVENDVALLIDQEHLPESKKFSISDKIEVEVLGVEEYNVILSAK |
| 4MTN Chain:A ((5-406)) | -GNEVLRIVDSIHRDKSIDKEIVFEGVEQAILSAARKHFGE--------------------EEVIEVHID-RTSGQPMVKT----NGREIDRDELGDILGRISAQTKQVMIQKIREAERDTLFDEYAQL--RGQIVSGTVTRNEGSAITVNIGKA-EAILPRS-----EMIPGESHRPNERIRAVVLEVKKMGPRVRVVLSR--------------------------------AHPDFVRRLLELEIPEVNERIIEIRSLAREA----------------------GYRTKVAVSCADSNIDPVGACVG-------------------------------VRGARIRNVGEEL-------GGERIEVVRWN-----------------DSLQVLVPNAMQPSEV--EDVILCPMLGRVLVLVRDDQLSLAIG----------KRGQNVRLASKLVGWDIDVMTREELDQQLDQAVVAYSQIPGVSEELAEGLVSQGFLSFEDLSVIEPDELMEMGSLTQEQADVIVEYAERESERIEKEQDLRRATEKAERQSQE---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MTN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13333 for 2815 contacts (4.7/contact) +
2D Compatibility (PS) -40731 + (NN) -857 + (LL) 12076
1D Compatibility (HY) -9200 + (ID) 3450
Total energy: -28829.0 ( -10.24 by residue)
QMean score : 0.222
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