Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKEFEIEPLLKDKVPHQTKAVVAMSGGVDSSVAAVLLHRLGYQVIGVTLQLYGADGNSNTRKKGVCCAGQDIYDAKRVAEGTGF-PHYILNYEEI--FKKEVIESF---AQTYIQGKTPIPCIKCNQTVKFRDLLQVTRNLGADVLITGHYVRRLEKN--GEVKLCRGIDKSKDQSYFLFATTKEQLKLLRFPLGGFYKCNVRKLARYFSLPISEKPDSQDICFVSENYSKTIAKLAPQSIQKGKIVDVNGKVLGEHNGIVNFTVGQRKGLGIAYSEPLYVVRINTKNNEIVVGPVNALMQRKILVKELNWLEQPKKGMEVTVKLRSLHSGSLAKIYPAKEQNKAYVILNDDYFSISPGQACVAYKDEQVIGGGWICS |
| 2PG3 Chain:A ((2-177)) | -----------------MKRAVVVFSGGQDSTTCLIQALQDYDDVHCITFDYGQRH-------------RAEIEVAQELSQKLGAAAHKVLDVGLLNELATSSLTRDSIPVPD-------NTFVPGRNILFLTLASIYAYQVGAEAVITGVCETDFSGYPDCRDEFVKALNQ------AIV-LGIARDIRFETPLMWLNKAETWALADYYQQLDTVRYHTLTCYNGIKGDGCGQCAACHLRANGLAQYQKDAATVMASLKQKVGL------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PG3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86047 for 1176 contacts (-73.2/contact) +
2D Compatibility (PS) -17019 + (NN) -5532 + (LL) 9648
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -104250.0 ( -88.65 by residue)
QMean score : 0.360
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