Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHSKPPWLRAKAPTGEIFNETLNTVKLHGLHT--------------VCEEAACPNIGECWNKRHATVMILGSVCTRACAFCNVATGIPNKLDPHEPENLAKAIKKLN-LKYVVITSVDRDDLPDGGASQFIKCIEEIRKITPETT--VEILTPDFLNKKGAFEAIAVASPDVYNHNIEMVPRLYARIRP--------RARYFHSLYLLKMVKQINPKLLTKSG---LMVGLGETK-------------EEVLQVMDDLRSAEVDFITIGQY-----------LQPTPKHAKIDRYVTPEEF-----------EHYKYIAYSKGFLVVASSPLTRSSYHAEEDFNRLKACR--------- |
2C0H Chain:A ((1-353)) | ---AAVRLSVS---GTNLNYNGHHIFLSGANQAWVNYARDFGHNQYSKGKSTFESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTLWNGAVKQSTHYRLNGLMVDTRKLQSYIDHALKPMANALKNEKALGGWDIMNEPEGEIKPGESSSEPCFDTRHLSGSGAGWAGHLYSAQEIGRFVNWQAAAIKEVDPGAMVTVGSWNMKADTDAMGFHNLYSDHCLVKAGGKQSGTLSFYQVHTYDWQNHFGNESPFKHSFSNFRLKKPMVIGEFNQEHGAGMSSESMFEWAYTKGYSGAWTWSRTDVSWNNQLRGMQHLKSRTDHGQVQFGL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C0H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103417 for 2226 contacts (-46.5/contact) +
2D Compatibility (PS) -29845 + (NN) -15280 + (LL) 280
1D Compatibility (HY) -1200 + (ID) 1400
Total energy: -150862.0 ( -67.77 by residue)
QMean score : 0.343
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