Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRIPFLLILIIVIASLPVINNWLSYHNQTLNDDYIGERLDNYISRNFDKIIKILREESIKSNYAARDNATKGKILQYENKIFDLAYPYLGNENSNIIAVGFFDYSCGYCKAIKDDIKQLI-NDG---KIKYIFRDTPILGNN--------------------------------------------------SLKAAKSALAVYFIDKGKYFDFHYAILDHKG----EF--SDENILDIVKSIGINEDNFNNSMKNNAG-KIEQMINDSKFLVRELGAGGTPFLIIGDS-LFIGATDLDVLRKKVDELSHKQN |
| 3GL5 Chain:A ((2-214)) | -----------------------------------------------------------------------------------------------HMRVEIWSDIACPWCYVGKARFEKALAAFPHRDGVEVVHRSFELDPGRAKDDVQPVLTMLTAKYGMSQEQAQAGEDNLGAQAAAEGLAYRTRDRDHGSTFDLHRLLHLAKERG--RHEALLDAFYRGNFADERSVFNDDERLVELAVGAGLDAEEVRAVL--ADPAAYADEVRADEREAAQLGATGVPFFVLDRAYGVSGAQPAEVFTQALTQAWGERT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GL5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85853 for 1162 contacts (-73.9/contact) +
2D Compatibility (PS) -16525 + (NN) -10260 + (LL) 6500
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -110638.0 ( -95.21 by residue)
QMean score : 0.503
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