Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLNMAEIKKDVAVIMGSESDYSTMIHAVDMLTELGILHDVFIISAHRTPERLFNFAQSAQEKGFRVIIAGAGGAAHLPGMVASLTCLPVIGVPVHSKQLNGLDSLLSIVQMPKGVPVATMSIGESGAYNAAIAAASVLSISNSEIADRLKKWRKEQTEVVKEKPASQ
1U11 Chain:A ((20-178))
------SAPVVGIIMGSQSDWETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAERGLNVIIAGAGGAAHLPGMCAAWTRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASILALYNPALAARLETWRALQTASVPNSPI--
General information:
TITO was launched using:
RESULT:
Template:
1U11.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -155677 for 1315 contacts (-118.4/contact) +
2D Compatibility (PS) -17412 + (NN) -5781 + (LL) 852
1D Compatibility (HY) -15200 + (ID) 4700
Total energy: -197918.0 ( -150.51 by residue)
QMean score : 0.654
(partial model without unconserved sides chains):
PDB file :
Tito_1U11.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U11-query.scw
PDB file :
Tito_Scwrl_1U11.pdb
: