Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPNIVTRFAPSPTGFLHIGGARTALFNWLYAKHHGGRFLLRIEDTDRKRSTQEAIDAIINGLKWLGVSYDGE--------IVYQSKRIERHIEVANLLVEKGKAYCCCCPEDKVAEKKAKAREERKIYKH-------KCTSVIPDAKPVVRFNVPDSQEIIVDDKIYGHIKVNSDQLDDMVILRSDNTPTYIFAVVVDDHDAGITDIIRGSDHLTNTFKQVLIYQALDFDIPRFAHVPLIHGRDGNKLSKRHGATSVCDYEKMGILPKAMRNYLLRLGWSHGN-DEIISNEQAVKWFNLESIGRSPARLNFKKLEHLNNHYINN-MSNEDILTLMLGESTLTNKK--K-NYLLQGLTELKKRANYLTELLDLAQFYIKDPPFDLSEEAEQVVK-SNLDIIKLLASFLSNIGDKNWNKGFLSSQVKEFSKLHSAKISDIYHSLRAPITGVMDAPGIIDIMIILGKDECIRRLQAV |
| 1J09 Chain:A ((1-466)) | --MVVTRIAPSPTGDPHVGTAYIALFNYAWARRNGGRFIVRIEDTDRARYVPGAEERILAALKWLGLSYDEGPDVGGPHGPYRQSERLPLYQKYAEELLKRGWAYRAFETPEELEQIRKEK--GGYDGRARNIPPEEAEERARRGEPHVIRLKVPRPGTTEVKDELRGVVVYDNQEIPDVVLLKSDGYPTYHLANVVDDHLMGVTDVIRAEEWLVSTPIHVLLYRAFGWEAPRFYHMPLLRNPDKTKISKRKSHTSLDWYKAEGFLPEALRNYLCLMGFSMPDGREIFTLEEFIQAFTWERVSLGGPVFDLEKLRWMNGKYIREVLSLEEVAERVKPFLREAGLSWESEAYLRRAVELMRPRFDTLKEFPEKARYLFTE-DYPVSEKA-QRKLEEGLPLLKELYPRLRAQ--EEWTEAALEALLRGFAAEKGVKLGQVAQPLRAALTGSLETPGLFEILALLGKERALRRLERA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J09.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224546 for 3494 contacts (-64.3/contact) +
2D Compatibility (PS) -47505 + (NN) -20479 + (LL) -12
1D Compatibility (HY) -28400 + (ID) 7350
Total energy: -328292.0 ( -93.96 by residue)
QMean score : 0.568
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