Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQDFKALENLQTKTLEAEKGGGLDRINKQHEKGKLTARERLSILLDENSFEEYDKFVKRHVTDFGMQNASFLGDGVVIGHGTIYGRKVFVYSQDFTVFGGSLGASHAKKICKIIDMAINVRVPIIGLNDSGGARIQEGVNSLAGYGELFQRNVNASGVIPQISLIMGPCAGGAVYSPALTDFTFMVKNSSYMFITGPDVVKKVTYEDVNHEDLGGAKIHTSKTGVVDFAFNNDVEMLLKIREFFTFLPANNQELPKSVPICDDVDDINESLNTLIPHNPNTPYDMHELIEKVCDERNFFELKPDFARNIIIGFGRIKGNTVGIVANQPMYLAGCLDIDSSRKAARFVRFCDAFNIPITTLIDVPGFLPGTNQEYNNIIQHGAKLLYAYAEATVPKISLITRKAYGGAYIVMNSKHLKGDINYAWPTAEIAVMGPESAVEIIFRHEKDQ--------QTLIKEYKEKFANPFFAASHGYIDDIIVPSKTRYHLYKALELLKNKKIERIWKKHDNLPL |
| 1VRG Chain:A ((14-527)) | -SLRDKIEELKKIEKEIEQGGGPEKVEKQHRAGKLTAWERLELLLDPGTFVEIDKFVEHRNTYFGLDKVKLPRDGVITGVGEINGRKVAVFSQDFTVMGGSLGEMHAKKIVKLLDLALKMGIPVIGINDSGGARIQEGVDALAGYGEIFLRNTLASGVVPQITVIAGPCAGGAVYSPALTDFIVMVDQTARMFITGPNVIKAVTGEEISQEDLGGAMVHNQKSGNAHFLADNDEKAMSLVRTLLSYLPSNNAEEPPVEDPDT-SLETPEDILDILPDNPNKGYDVRDVIKRVVDHGEFFEVQPYFAKNIVIGFARIQGKTVGIVANQPSVLAGVLDIDSSDKAARFIRFLDAFNIPILTFVDTPGYLPGVAQEHGGIIRHGAKLLYAYSEATVPKITVILRKAYGGAYIAMGSKHLGADMVLAWPSAEIAVMGPEGAANIIFKREIEASSNPEETRRKLIEEYKQQFANPYIAASRGYVDMVIDPRETRKYIMRALEVCETKVEYRPKKKHGNIPL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1VRG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -214790 for 4372 contacts (-49.1/contact) +
2D Compatibility (PS) -55260 + (NN) -26187 + (LL) 132
1D Compatibility (HY) -46000 + (ID) 14300
Total energy: -356405.0 ( -81.52 by residue)
QMean score : 0.489
|
|
|