Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHDKFDNVTFTINGTRESLFNFVFCEDQCTELSVQKTLDYLRARNIEATWVMNSHTKTQGILEKCGIKHVSTPKKVLLNMKNYFLPADVVPGLKLNAVTSSNLLKQLDSYTSKIFHHSIGI---V----STFFRGLSNYDDKNSGLRFFLVTLNDEI-IGTCGFYI----------QDSVAGFYSDGVLPIYRNRGIGTQMVLDRIKIIQQLECKHVVAHCMKPSVNLYKRLGFQILGNLYLYTSSA
2Q0Y Chain:A ((2-147))
--------------------------------------------------------------------------------------------MECRPL-CIDDLELVCRHREAMFREAGRDALTLAAMQDPFRDWLLPRL-ADGSYFGWVMEEGGAPLAGIGLMVIEWPPHPSHPLQDKRGYILNLYVDPSHRERGIGQALMNRAEAEFAERGIAFAVLHATEMGQPLYARMGWSPTTEMSKPIAG-
General information:
TITO was launched using:
RESULT:
Template:
2Q0Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93785 for 871 contacts (-107.7/contact) +
2D Compatibility (PS) -13684 + (NN) -3723 + (LL) 6316
1D Compatibility (HY) -2400 + (ID) 1050
Total energy: -108326.0 ( -124.37 by residue)
QMean score : 0.424
(partial model without unconserved sides chains):
PDB file :
Tito_2Q0Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q0Y-query.scw
PDB file :
Tito_Scwrl_2Q0Y.pdb
: