Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNFEQIKKDITENDVVLYMKGTSDFPQCGFSGLVVSILKKLNVK---FKYINVLENDEIRQSIKKFSNWPTIPQLYIKGEFIGGCDITREIYEKGELQSLLKEKKIVE
3GX8 Chain:A ((4-110))
-EIRKAIEDAIESAPVVLFMKGTPEFPKCGFSRATIGLLGNQGVDPAKFAAYNVLEDPELREGIKEFSEWPTIPQLYVNKEFIGGCDVITSMARSGELADLLEEAQALV
General information:
TITO was launched using:
RESULT:
Template:
3GX8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69106 for 782 contacts (-88.4/contact) +
2D Compatibility (PS) -11097 + (NN) -3729 + (LL) 208
1D Compatibility (HY) -11200 + (ID) 2450
Total energy: -97374.0 ( -124.52 by residue)
QMean score : 0.704
(partial model without unconserved sides chains):
PDB file :
Tito_3GX8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GX8-query.scw
PDB file :
Tito_Scwrl_3GX8.pdb
: